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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015954336.1_cds_XP_016493241.1_83371
CDS Infomation

[gene=LOC107812610] [db_xref=GeneID:107812610] [protein=beta-galactosidase-like] [protein_id=XP_016493241.1] [location=complement(join(21966..22074,22173..22378,22481..22591,22910..23020,23126..23235,23355..23464,23925..24100,24208..24372,24465..24583,24699..24786,25101..25206,25302..25390,26615..26758,26880..26972,27715..27781,27894..28006,28102..28197,28458..28622))] [gbkey=CDS]
Sequence

ATGCTAAGAACAAATGTATTATTGTTTCTGTTCTTAGTATTATGTTCATTGGTTTTTTCT
TCAGTAAAAGCCACTGTTTCTTATGATGACAGAGCTATAATTATAAATGGGAGAAGAAAA
ATTCTTATTTCTGGTTCTATTCATTACCCAAGAAGCACTCCTGAGATGTGGCCTGATCTT
ATACAAAAGGCAAAAGATGGAGGTTTAGATGTTATTGAAACTTATGTTTTTTGGAATGGG
CATGAACCTTCTCCTGGAAAATATAATTTTGAGGGGAGATATGATCTTGTTAAGTTCGTC
AAGTTGGTACAAAAAGCAGGACTTTATGTTAATCTACGTATTGGCCCTTACGTTTGTGCA
GAATGGAACTTTGGGGGATTTCCTATTTGGCTAAAATATATTCCTGGTATGGAATTTAGA
ACAGACAATCAGCCTTTCAAGGTGGCTATGCAAGGATTTGTACAGAAAATAGTCAACATG
ATGAAGTCAGAAAAATTATTTGAACCTCAAGGAGGACCAATAATAATTGCCCAGATAGAA
AATGAGTATGGACCAGTAGAATGGGAAATTGGTGCTCCTGGTAAAGCTTATACAAAATGG
ACAGCTCAAATGGCTGTAGGTCTTAAAACTGGAGTTCCTTGGATCATGTGTAAACAAGAG
GATGCCCCTGATCCTGTGATTGATACCTGCAATGGATTCTACTGCGAAGGTTTTCGTCCT
AATAAGCCTTACAAACCAAAAATGTGGACAGAAGTCTGGACTGGCTGGTATACAAAATTT
GGTGGTCCAGTTCCTCAAAGGCCAGTTGAAGACATTGCATTTTCAGTTGCAAGGTTTGTT
CAGAACAATGGTTCATTCTTCAATTACTATATGTATCATGGAGGAACAAATTTTGGCCGA
ACATCTTCAGGGCTTTTCATTGCAACTAGCTATGATTATGATGCTCCTCTAGATGAATAT
GGGCTGCTGAATGAACCAAAATATGGACATTTGAGAGACTTGCATAAAGCTATTAAGCTA
TGTGAACCAGCTTTAGTTTCATCATATCCCACAGTGACTAAGATTGGCAATAATCAAGAG
GCTCATGTCTATAGATCAAAATCTGGAAATTGTGCTGCATTTCTATCCAACTACGACTCA
AAATATTCAGTTAAAGTCACCTTTCAAAATAAGCCATATGATCTGCCTCCTTGGTCCATC
AGTATTCTTCCTGACTGCAAAACTGCTGTTTACAACACTGCAAAGGTTAGCTCCCGAAGC
TCGAGCATAAAGATGACTTCGACGGGCAGTGGATTGTCTTGGCAGTCATACAATGAAGAA
ACTCCGACTGCTGATGATAGCGATACGCTTTCAGCAAACGGGTTATGGGAACAGAAAAAT
GTCACCAGAGATTCTTCAGACTATCTGTGGTACATGACAGATGTAAATATAGCATCTGGT
GAAGGATTTCTAAAGAATGGAAAGGACCCTTATCTCACTGTTATGTCGGCCGGTCATGTC
CTGCATGTCTTCATCAATGGCAAACTATCAGGGACTGTTTATGGGACATTGGACAATCCA
AAACTTACGTATAGTGGCAATGTGAAACTAAGAGCTGGTATTAACAAGATTTCTCTGCTC
AGTGTTTCTGTTGGTCTCCCGAACGTTGGCGTGCATTTTGATACGTGGAATGCAGGAGTT
CTAGGTCCAATTACATTGAGTGGTCTCAATGAGGGGAAAAGAGACTTAACAAAACAGAGA
TGGTCTTACAAGGTTGGTCTAAAAGGTGAATCATTAAGGCTTCATACATTAAGCGGGAGT
TCTTCTGTTGAATGGATTAAAGGTTCACTAGTGGCTCAAAAGCAGCCATTGACTTGGTAC
AAGGCTACATTTAACGCGCCCGGAGGAAATGACCCTCTAGCTTTGGACATGGCAAGTATG
GGAAAAGGTGAGATATGGATAAATGGCGAAGGCGTAGGTCGCCACTGGCCTGGATATATA
GCACAAGGTGACTGTGGAAAATGCAATTATGCTGGAACATTCAATGAGAAGAAATGTCAA
ACTAATTGTGGACAACCTTCTCAAAGATGGTACCATGTTCCAAGATCATGGCTAAAACCT
AGTGGAAACCTATTGGTAGTATTTGAAGAATGGGGTGGTGATCCAACAGGAATTTCTTTG
GTCAGAAGATCAAGATAG

Peptide Sequence

PEP ID

XP_016493241.1
PEP Infomation

PREDICTED: beta-galactosidase-like [Nicotiana tabacum]
Sequence

MLRTNVLLFLFLVLCSLVFSSVKATVSYDDRAIIINGRRKILISGSIHYPRSTPEMWPDL
IQKAKDGGLDVIETYVFWNGHEPSPGKYNFEGRYDLVKFVKLVQKAGLYVNLRIGPYVCA
EWNFGGFPIWLKYIPGMEFRTDNQPFKVAMQGFVQKIVNMMKSEKLFEPQGGPIIIAQIE
NEYGPVEWEIGAPGKAYTKWTAQMAVGLKTGVPWIMCKQEDAPDPVIDTCNGFYCEGFRP
NKPYKPKMWTEVWTGWYTKFGGPVPQRPVEDIAFSVARFVQNNGSFFNYYMYHGGTNFGR
TSSGLFIATSYDYDAPLDEYGLLNEPKYGHLRDLHKAIKLCEPALVSSYPTVTKIGNNQE
AHVYRSKSGNCAAFLSNYDSKYSVKVTFQNKPYDLPPWSISILPDCKTAVYNTAKVSSRS
SSIKMTSTGSGLSWQSYNEETPTADDSDTLSANGLWEQKNVTRDSSDYLWYMTDVNIASG
EGFLKNGKDPYLTVMSAGHVLHVFINGKLSGTVYGTLDNPKLTYSGNVKLRAGINKISLL
SVSVGLPNVGVHFDTWNAGVLGPITLSGLNEGKRDLTKQRWSYKVGLKGESLRLHTLSGS
SSVEWIKGSLVAQKQPLTWYKATFNAPGGNDPLALDMASMGKGEIWINGEGVGRHWPGYI
AQGDCGKCNYAGTFNEKKCQTNCGQPSQRWYHVPRSWLKPSGNLLVVFEEWGGDPTGISL
VRRSR

Transcript Sequence

Gene sequence data has not been registered.